STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXC11Homeobox C11. (304 aa)    
Predicted Functional Partners:
HOXB7
Homeobox B7.
   
 
0.602
ENSPVAP00000000703
annotation not available
    
 
 0.556
ENSPVAP00000015105
annotation not available
    
 
 0.556
PBX2
PBX homeobox 2.
    
 
 0.548
PBX4
PBX homeobox 4.
    
 
 0.548
EYA1
EYA transcriptional coactivator and phosphatase 1.
    
 
 0.542
DLX4
Distal-less homeobox 4.
    
 
0.517
MAP3K6
Mitogen-activated protein kinase kinase kinase 6.
      
 0.516
CLYBL
Citrate lyase beta like.
      
 0.514
ENSPVAP00000002021
annotation not available
      
 0.511
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.