STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C6orf47Chromosome 6 open reading frame 47. (296 aa)    
Predicted Functional Partners:
ENSPVAP00000011670
annotation not available
      
 0.679
ENSPVAP00000011673
annotation not available
      
 0.657
ABT1
Activator of basal transcription 1.
      
 0.569
TFAP2D
Transcription factor AP-2 delta.
      
 0.569
ABHD16A
Abhydrolase domain containing 16A.
      
 0.568
TRIM40
Tripartite motif containing 40.
      
 0.551
PRRC2A
Proline rich coiled-coil 2A.
      
 0.551
ENSPVAP00000012659
annotation not available
      
 0.497
PKHD1
PKHD1 ciliary IPT domain containing fibrocystin/polyductin.
      
 0.493
APOM
Apolipoprotein M.
      
 0.481
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.