STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALMS1ALMS1 centrosome and basal body associated protein. (4035 aa)    
Predicted Functional Partners:
PLK1
Polo like kinase 1.
    
  0.945
CMYA5
Cardiomyopathy associated 5.
  
 
 
 0.850
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.830
CEP57
Centrosomal protein 57.
      
 0.769
CCDC158
Coiled-coil domain containing 158.
   
 
 0.729
PPP6R3
Protein phosphatase 6 regulatory subunit 3.
      
 0.721
ENSPVAP00000006200
annotation not available
    
  0.717
RANBP2
RAN binding protein 2.
    
 0.710
CCDC136
Coiled-coil domain containing 136.
  
 
 0.684
ERCC6L
ERCC excision repair 6 like, spindle assembly checkpoint helicase.
   
 0.674
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.