STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP43Growth associated protein 43. (271 aa)    
Predicted Functional Partners:
LYPLA2
Lysophospholipase 2.
     
 0.942
ATF3
Activating transcription factor 3.
      
 0.769
STMN2
Stathmin 2.
   
  
 0.754
SNAP25
Synaptosome associated protein 25.
   
  
 0.741
MAP2
Microtubule associated protein 2.
   
 
 0.719
SYP
Synaptophysin.
   
  
 0.711
CNGA2
Cyclic nucleotide gated channel subunit alpha 2.
      
 0.698
ATOH7
Atonal bHLH transcription factor 7.
      
 0.693
ENSPVAP00000008365
annotation not available
      
 0.693
BDNF
Brain derived neurotrophic factor.
      
 0.684
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.