STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTPRUProtein tyrosine phosphatase receptor type U. (1435 aa)    
Predicted Functional Partners:
KIT
KIT proto-oncogene, receptor tyrosine kinase.
    
  0.951
ASB3
Ankyrin repeat and SOCS box containing 3.
    
 
 0.778
MXRA8
Matrix remodeling associated 8.
      
 0.769
NIPAL1
NIPA like domain containing 1.
      
 0.769
CTNNB1
Catenin beta 1.
    
 0.752
PTK7
Protein tyrosine kinase 7 (inactive).
    
 0.738
LRIT1
Leucine rich repeat, Ig-like and transmembrane domains 1.
    
  0.713
LRIT3
Leucine rich repeat, Ig-like and transmembrane domains 3.
    
  0.713
ENSPVAP00000004240
annotation not available
      
 0.697
JUP
Junction plakoglobin.
    
 0.673
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.