STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACTN4Actinin alpha 4. (911 aa)    
Predicted Functional Partners:
VCL
Vinculin.
   
 0.981
ITGB1
Integrin subunit beta 1.
   
 0.947
ACTBL2
Actin beta like 2.
   
 0.937
ACTL8
Actin like 8.
   
 0.937
ZYX
Zyxin.
   
 0.935
LMO7
LIM domain 7.
    
 0.929
CTNNA3
Catenin alpha 3.
   
 0.926
CTNNA1
Catenin alpha 1.
   
 0.917
CTNNA2
Catenin alpha 2.
   
 0.917
MICALL2
MICAL like 2.
    
0.916
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.