STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPVAP00000012233annotation not available (387 aa)    
Predicted Functional Partners:
RBM25
RNA binding motif protein 25.
   
 0.968
SNRPC
Small nuclear ribonucleoprotein polypeptide C.
    
 
 0.911
SF3B3
Splicing factor 3b subunit 3.
    
 0.894
ENSPVAP00000003844
annotation not available
    
 0.892
SART1
Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.
    
 0.891
NCBP2
Nuclear cap binding protein subunit 2.
    
 
 0.891
SNRPD2
Small nuclear ribonucleoprotein D2 polypeptide.
   
 
 0.887
SNRPD1
Small nuclear ribonucleoprotein D1 polypeptide.
    
 
 0.876
ENSPVAP00000001964
annotation not available
   
 
 0.872
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
   
 
 0.871
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.