STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHF13PHD finger protein 13. (300 aa)    
Predicted Functional Partners:
MCRS1
Microspherule protein 1.
    
 0.888
ENSPVAP00000008689
annotation not available
    
 0.864
KANSL3
KAT8 regulatory NSL complex subunit 3.
    
 0.841
ENSPVAP00000016340
annotation not available
    
 0.841
PHF1
PHD finger protein 1.
      
 0.769
SETD2
SET domain containing 2, histone lysine methyltransferase.
   
 0.733
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.697
PKIG
cAMP-dependent protein kinase inhibitor gamma.
      
 0.695
KMT5A
Lysine methyltransferase 5A.
    
 0.680
ENSPVAP00000000808
annotation not available
    
 
 0.671
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.