STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BEST1Bestrophin 1. (607 aa)    
Predicted Functional Partners:
GLUL
Glutamate-ammonia ligase.
    
 
 0.625
MITF
Melanocyte inducing transcription factor.
      
 0.613
LGSN
Lengsin, lens protein with glutamine synthetase domain.
    
   0.593
RDH5
Retinol dehydrogenase 5.
      
 0.584
PPP1R32
Protein phosphatase 1 regulatory subunit 32.
      
 0.577
RLBP1
Retinaldehyde binding protein 1.
      
 0.565
TMEM98
Transmembrane protein 98.
      
 0.551
PIGU
Phosphatidylinositol glycan anchor biosynthesis class U.
      
 0.512
DEPDC1
DEP domain containing 1.
      
 0.510
RPE65
Retinoid isomerohydrolase RPE65.
      
 0.510
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.