STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNX4Sorting nexin 4. (435 aa)    
Predicted Functional Partners:
SNX7
Sorting nexin 7.
  
 
0.970
SNX30
Sorting nexin family member 30.
  
 
0.957
SNX5
Sorting nexin 5.
   
 0.956
GAK
Cyclin G associated kinase.
    
 0.920
VPS35
VPS35 retromer complex component.
   
 
 0.919
VPS29
VPS29 retromer complex component.
    
 
 0.916
VPS26B
VPS26, retromer complex component B.
   
 
 0.905
SNX6
Sorting nexin 6.
   
 0.888
SNX32
Sorting nexin 32.
   
 0.888
SNX33
Sorting nexin 33.
   
 0.799
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.