STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCC1LRCC1 like. (464 aa)    
Predicted Functional Partners:
NEK6
NIMA related kinase 6.
    
 0.814
TRUB2
TruB pseudouridine synthase family member 2.
   
 
 0.755
RANBP2
RAN binding protein 2.
    
 0.727
PDE6D
Phosphodiesterase 6D.
    
 
 0.695
ENSPVAP00000013896
annotation not available
    
 0.687
WHRN
Whirlin.
    
 
 0.684
RANBP1
RAN binding protein 1.
    
 0.679
RPGRIP1
RPGR interacting protein 1.
    
 
 0.668
RPUSD4
RNA pseudouridine synthase D4.
    
 
 0.662
ZFAND4
Zinc finger AN1-type containing 4.
    
 0.657
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.