STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MSX1Msh homeobox 1. (303 aa)    
Predicted Functional Partners:
MSX2
Msh homeobox 2.
  
0.972
E2F4
E2F transcription factor 4.
      
 0.788
TFAP2A
Transcription factor AP-2 alpha.
    
 
 0.785
PAX9
Paired box 9.
    
 
 0.773
WNT1
Wnt family member 1.
      
 0.769
BMPR1A
Bone morphogenetic protein receptor type 1A.
   
  
 0.714
RUNX2
RUNX family transcription factor 2.
    
 0.695
BMP4
Bone morphogenetic protein 4.
      
 0.681
LEF1
Lymphoid enhancer binding factor 1.
   
  
 0.678
SNAI2
Snail family transcriptional repressor 2.
   
  
 0.629
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.