STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPNA6Karyopherin subunit alpha 6. (536 aa)    
Predicted Functional Partners:
KPNB1
Karyopherin subunit beta 1.
   
 0.988
CSE1L
Chromosome segregation 1 like.
   
 0.867
TBKBP1
TBK1 binding protein 1.
   
 0.848
ZBTB25
Zinc finger and BTB domain containing 25.
   
 
 0.827
USP33
Ubiquitin specific peptidase 33.
   
 
 0.781
STK40
Serine/threonine kinase 40.
   
  
 0.777
ENSPVAP00000001166
annotation not available
    
 
 0.776
KPNA1
Karyopherin subunit alpha 1.
  
 
0.773
VAC14
VAC14 component of PIKFYVE complex.
      
 0.769
SOAT1
Sterol O-acyltransferase 1.
      
 0.769
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.