STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC28BCoiled-coil domain containing 28B. (240 aa)    
Predicted Functional Partners:
TXLNA
Taxilin alpha.
 
    
 0.599
IQCC
IQ motif containing C.
 
      0.586
BBS7
Bardet-Biedl syndrome 7.
    
 
 0.582
ENSPVAP00000016961
annotation not available
    
 
 0.527
BBS4
Bardet-Biedl syndrome 4.
    
 
 0.525
TMEM234
Transmembrane protein 234.
      
 0.509
WDPCP
WD repeat containing planar cell polarity effector.
      
 0.505
CACHD1
Cache domain containing 1.
      
 0.505
MOB3B
MOB kinase activator 3B.
      
 0.489
TTC8
Tetratricopeptide repeat domain 8.
    
 
 0.481
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.