STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCUN1D1Defective in cullin neddylation 1 domain containing 1. (248 aa)    
Predicted Functional Partners:
CUL1
Cullin 1.
   
 0.929
RBX1
Ring-box 1.
    
 0.921
UBE2M
Ubiquitin conjugating enzyme E2 M.
    
 0.919
CUL3
Cullin 3.
   
 0.911
CUL5
Cullin 5.
   
 0.889
ENSPVAP00000015982
annotation not available
    
 0.888
NEDD8
NEDD8 ubiquitin like modifier.
    
 0.886
CUL2
Cullin 2.
   
 0.849
RNF7
Ring finger protein 7.
    
 0.830
CACUL1
CDK2 associated cullin domain 1.
   
 0.814
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.