STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GHITMGrowth hormone inducible transmembrane protein. (344 aa)    
Predicted Functional Partners:
BSDC1
BSD domain containing 1.
   
    0.818
ENSPVAP00000005330
annotation not available
      
 0.786
CLRN3
Clarin 3.
      
 0.776
TSPAN3
Tetraspanin 3.
      
 0.769
TXNL4A
Thioredoxin like 4A.
      
 0.769
TSPAN18
Tetraspanin 18.
      
 0.769
TSPAN4
Tetraspanin 4.
      
 0.769
UQCRC2
Ubiquinol-cytochrome c reductase core protein 2.
   
 
 0.731
BANP
BTG3 associated nuclear protein.
      
 0.697
TMBIM6
Transmembrane BAX inhibitor motif containing 6.
   
  
 0.689
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.