STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBFOX1RNA binding fox-1 homolog 1. (418 aa)    
Predicted Functional Partners:
PTBP2
Polypyrimidine tract binding protein 2.
    
 
 0.815
PTBP1
Polypyrimidine tract binding protein 1.
    
 
 0.753
RBM24
RNA binding motif protein 24.
  
 
 0.729
QKI
QKI, KH domain containing RNA binding.
   
 
 0.729
ENSPVAP00000016950
annotation not available
      
 0.680
ELAVL4
ELAV like RNA binding protein 4.
   
 
 0.676
ATXN2
Ataxin 2.
    
 
 0.675
RBM38
RNA binding motif protein 38.
   
 
 0.670
TMEM25
Transmembrane protein 25.
      
 0.661
RBPMS
RNA binding protein, mRNA processing factor.
   
 
 0.640
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.