STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM154Transmembrane protein 154. (186 aa)    
Predicted Functional Partners:
TMEM38A
Transmembrane protein 38A.
      
 0.855
SYTL3
Synaptotagmin like 3.
      
 0.800
ARFIP1
ADP ribosylation factor interacting protein 1.
      
 0.774
TMEM223
Transmembrane protein 223.
      
 0.769
CCR5
C-C motif chemokine receptor 5 (gene/pseudogene).
      
 0.769
DPPA2
Developmental pluripotency associated 2.
      
 0.749
TMEM53
Transmembrane protein 53.
      
 0.707
GTF2H5
General transcription factor IIH subunit 5.
      
 0.663
DPPA4
Developmental pluripotency associated 4.
      
 0.573
TMEM147
Transmembrane protein 147.
      
 0.565
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.