STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRWD3Bromodomain and WD repeat domain containing 3. (1668 aa)    
Predicted Functional Partners:
UBXN7
UBX domain protein 7.
   
 0.926
ENSPVAP00000015575
annotation not available
   
 0.802
MYSM1
Myb like, SWIRM and MPN domains 1.
   
  0.799
TAF10
TATA-box binding protein associated factor 10.
    
 0.777
TAF12
TATA-box binding protein associated factor 12.
    
 0.777
TAF2
TATA-box binding protein associated factor 2.
   
 0.775
TEX10
Testis expressed 10.
   
 0.765
CPSF1
Cleavage and polyadenylation specific factor 1.
    
 0.764
IFT140
Intraflagellar transport 140.
    
 0.764
WDR19
WD repeat domain 19.
    
 0.761
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.