STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSM12LSM12 homolog. (195 aa)    
Predicted Functional Partners:
ATXN2
Ataxin 2.
    
 0.974
ATXN2L
Ataxin 2 like.
    
 0.961
DDX6
DEAD-box helicase 6.
    
 
 0.907
TRNAU1AP
tRNA selenocysteine 1 associated protein 1.
    
 
 0.862
HNRNPDL
Heterogeneous nuclear ribonucleoprotein D like.
   
 
 0.836
LSM1
LSM1 homolog, mRNA degradation associated.
   
 
 0.823
RTRAF
RNA transcription, translation and transport factor.
    
 
 0.821
KIFBP
Kinesin family binding protein.
    
 
 0.812
TSEN2
tRNA splicing endonuclease subunit 2.
      
 0.714
ILF2
Interleukin enhancer binding factor 2.
   
  
 0.713
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.