STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASB16Ankyrin repeat and SOCS box containing 16. (453 aa)    
Predicted Functional Partners:
IFT81
Intraflagellar transport 81.
    
 0.633
BTRC
Beta-transducin repeat containing E3 ubiquitin protein ligase.
    
 0.628
GPS2
G protein pathway suppressor 2.
    
 
 0.621
COMMD8
COMM domain containing 8.
    
  0.600
NEDD8
NEDD8 ubiquitin like modifier.
    
  0.600
IFT22
Intraflagellar transport 22.
    
 0.595
IFT88
Intraflagellar transport 88.
   
 0.595
SLC4A1
Solute carrier family 4 member 1 (Diego blood group).
    
 0.593
IFT52
Intraflagellar transport 52.
    
 0.590
ENSPVAP00000007372
annotation not available
  
 
  0.582
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.