STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBTFL1Upstream binding transcription factor like 1. (391 aa)    
Predicted Functional Partners:
POLR1E
RNA polymerase I subunit E.
    
 0.801
SUPT4H1
SPT4 homolog, DSIF elongation factor subunit.
    
 0.790
GTF2H1
General transcription factor IIH subunit 1.
    
 0.788
GTF2H3
General transcription factor IIH subunit 3.
    
 0.783
H2AZ2
H2A.Z variant histone 2.
   
 0.777
H2AZ1
H2A.Z variant histone 1.
   
 0.777
ERCC3
ERCC excision repair 3, TFIIH core complex helicase subunit.
    
 0.774
ACTR8
Actin related protein 8.
    
 0.768
POLR1A
RNA polymerase I subunit A.
    
 0.752
ENSPVAP00000012751
annotation not available
    
 0.749
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.