STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL53Mitochondrial ribosomal protein L53. (112 aa)    
Predicted Functional Partners:
MRPL50
Mitochondrial ribosomal protein L50.
   
 
 0.966
MRPL51
Mitochondrial ribosomal protein L51.
    
 
 0.954
NDUFAB1
NADH:ubiquinone oxidoreductase subunit AB1.
    
 
 0.921
MRPL47
Mitochondrial ribosomal protein L47.
    
 
 0.915
MRPS18A
Mitochondrial ribosomal protein S18A.
   
 
 0.909
ENSPVAP00000011058
annotation not available
   
   0.906
ENSPVAP00000006059
annotation not available
   
 
 0.905
MRPL10
Mitochondrial ribosomal protein L10.
   
   0.904
MRPL4
Mitochondrial ribosomal protein L4.
   
 
 0.900
MRPL46
Mitochondrial ribosomal protein L46.
   
 
 0.896
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.