STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC31Tetratricopeptide repeat domain 31. (512 aa)    
Predicted Functional Partners:
NCBP1
Nuclear cap binding protein subunit 1.
    
 0.725
NCBP2
Nuclear cap binding protein subunit 2.
    
 0.714
FAU
FAU ubiquitin like and ribosomal protein S30 fusion.
   
  0.701
ENSPVAP00000001964
annotation not available
   
 0.685
SNRPG
Small nuclear ribonucleoprotein polypeptide G.
    
 0.682
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
    
 0.674
EIF4A3
Eukaryotic translation initiation factor 4A3.
   
 0.671
SNRPD3
Small nuclear ribonucleoprotein D3 polypeptide.
    
 0.667
SRSF2
Serine and arginine rich splicing factor 2.
    
 0.665
SF3B1
Splicing factor 3b subunit 1.
    
 0.647
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.