STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPVAP00000013220annotation not available (306 aa)    
Predicted Functional Partners:
UBXN7
UBX domain protein 7.
   
 0.954
UFD1
Ubiquitin recognition factor in ER associated degradation 1.
   
 0.821
ENSPVAP00000007535
annotation not available
    
 0.820
ENSPVAP00000008909
annotation not available
   
 0.803
UBXN1
UBX domain protein 1.
   
 0.800
YOD1
YOD1 deubiquitinase.
    
 0.797
ABCD3
ATP binding cassette subfamily D member 3.
     
 0.797
GDAP1L1
Ganglioside induced differentiation associated protein 1 like 1.
     
 0.792
ENSPVAP00000010787
annotation not available
   
 0.792
NPLOC4
NPL4 homolog, ubiquitin recognition factor.
   
 0.792
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.