STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL20A1Collagen type XX alpha 1 chain. (1290 aa)    
Predicted Functional Partners:
SLC35C2
Solute carrier family 35 member C2.
 
      0.852
COL26A1
Collagen type XXVI alpha 1 chain.
     
 0.795
COL23A1
Collagen type XXIII alpha 1 chain.
  
  
0.770
ENSPVAP00000004817
annotation not available
  
  
0.738
C1QC
Complement C1q C chain.
  
 
  0.684
SERPINH1
Serpin family H member 1.
    
 0.677
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
   
 0.671
PLOD3
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3.
   
 0.671
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
   
 0.671
COL10A1
Collagen type X alpha 1 chain.
  
  
 0.669
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.