STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LACTBL1Lactamase beta like 1. (515 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin dependent serine protein kinase.
   
 0.663
UTP20
UTP20 small subunit processome component.
   
  0.656
NRXN1
Neurexin 1.
    
 0.655
NRXN3
Neurexin 3.
    
 0.655
NRXN2
Neurexin 2.
    
 0.655
ENSPVAP00000013379
annotation not available
   
  0.611
WDR43
WD repeat domain 43.
    
 0.608
FCF1
FCF1 rRNA-processing protein.
    
  0.603
UTP11
UTP11 small subunit processome component.
    
  0.603
EMG1
EMG1 N1-specific pseudouridine methyltransferase.
    
  0.603
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.