STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGF13Fibroblast growth factor 13. (261 aa)    
Predicted Functional Partners:
SCN5A
Sodium voltage-gated channel alpha subunit 5.
    
 
 0.922
EGF
Epidermal growth factor.
    
 
 0.789
FGFR3
Fibroblast growth factor receptor 3.
    
 0.752
FGFR4
Fibroblast growth factor receptor 4.
    
 0.751
ENSPVAP00000016875
annotation not available
    
 
 0.744
FGFR2
Fibroblast growth factor receptor 2.
    
 0.734
FGFR1
Fibroblast growth factor receptor 1.
    
 0.734
HGF
Hepatocyte growth factor.
      
 0.692
CALM2
Calmodulin 2.
    
 
 0.668
CALM3
Calmodulin 3.
    
 
 0.668
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.