STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARL13BADP ribosylation factor like GTPase 13B. (430 aa)    
Predicted Functional Partners:
INPP5E
Inositol polyphosphate-5-phosphatase E.
     
 0.973
PDE6D
Phosphodiesterase 6D.
     
 0.971
IFT88
Intraflagellar transport 88.
    
 0.911
CETN2
Centrin 2.
    
 0.906
ENSPVAP00000015081
annotation not available
   
  0.850
CEP290
Centrosomal protein 290.
   
 
 0.842
ARL3
ADP ribosylation factor like GTPase 3.
   
0.821
IFT81
Intraflagellar transport 81.
    
 
 0.817
COG6
Component of oligomeric golgi complex 6.
    
 0.817
ENSPVAP00000011877
annotation not available
    
 0.812
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.