STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GBX1Gastrulation brain homeobox 1. (359 aa)    
Predicted Functional Partners:
NPAS1
Neuronal PAS domain protein 1.
      
 0.698
IQCA1L
IQ motif containing with AAA domain 1 like.
      
 0.695
ENSPVAP00000015014
annotation not available
      
 0.613
ZNF236
Zinc finger protein 236.
    
 
 0.575
ENSPVAP00000000703
annotation not available
    
 0.558
ENSPVAP00000015105
annotation not available
    
 0.558
LMO3
LIM domain only 3.
    
 
 0.556
OTP
Orthopedia homeobox.
    
 
 0.556
LMO1
LIM domain only 1.
    
 
 0.556
DLG4
Discs large MAGUK scaffold protein 4.
      
 0.546
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.