STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUPT20HSPT20 homolog, SAGA complex component. (778 aa)    
Predicted Functional Partners:
TRRAP
Transformation/transcription domain associated protein.
    
 0.997
SUPT3H
SPT3 homolog, SAGA and STAGA complex component.
    
 0.995
TAF12
TATA-box binding protein associated factor 12.
    
 0.995
TAF10
TATA-box binding protein associated factor 10.
    
 0.994
TADA3
Transcriptional adaptor 3.
    
 0.990
TAF6L
TATA-box binding protein associated factor 6 like.
    
 0.987
SUPT7L
SPT7 like, STAGA complex gamma subunit.
    
 0.986
TAF5L
TATA-box binding protein associated factor 5 like.
    
 0.978
TADA2A
Transcriptional adaptor 2A.
    
 0.976
ENSPVAP00000010169
annotation not available
    
 0.967
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.