STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FUBP1Far upstream element binding protein 1. (654 aa)    
Predicted Functional Partners:
PUF60
poly(U) binding splicing factor 60.
   
 
 0.970
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
   
 
 0.882
QKI
QKI, KH domain containing RNA binding.
   
 
 0.749
ZNF207
Zinc finger protein 207.
   
    0.747
CPSF6
Cleavage and polyadenylation specific factor 6.
   
   0.740
AIMP2
Aminoacyl tRNA synthetase complex interacting multifunctional protein 2.
    
 
 0.726
SRSF11
Serine and arginine rich splicing factor 11.
   
  
 0.708
PRPF40A
pre-mRNA processing factor 40 homolog A.
   
 0.702
PARN
poly(A)-specific ribonuclease.
    
 0.700
HNRNPR
Heterogeneous nuclear ribonucleoprotein R.
   
 
 0.685
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.