STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC86Coiled-coil domain containing 86. (360 aa)    
Predicted Functional Partners:
MRTO4
MRT4 homolog, ribosome maturation factor.
   
   0.783
TM2D1
TM2 domain containing 1.
      
 0.769
UFSP2
UFM1 specific peptidase 2.
      
 0.743
NIP7
Nucleolar pre-rRNA processing protein NIP7.
   
    0.727
NHP2
NHP2 ribonucleoprotein.
   
    0.676
APTX
Aprataxin.
      
 0.662
ENSPVAP00000000570
annotation not available
      
 0.660
NSA2
NSA2 ribosome biogenesis factor.
   
 
 0.645
GRWD1
Glutamate rich WD repeat containing 1.
   
    0.641
APOF
Apolipoprotein F.
      
 0.575
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.