STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYTL5Synaptotagmin like 5. (730 aa)    
Predicted Functional Partners:
RAB27A
RAB27A, member RAS oncogene family.
   
 
 0.820
RAB27B
RAB27B, member RAS oncogene family.
   
 
 0.811
RAB3D
RAB3D, member RAS oncogene family.
   
 0.754
STX3
Syntaxin 3.
    
 0.741
VAMP8
Vesicle associated membrane protein 8.
    
 0.737
ITSN2
Intersectin 2.
     
 0.667
RIMS2
Regulating synaptic membrane exocytosis 2.
     
0.649
KIF5B
Kinesin family member 5B.
      
 0.635
SNX10
Sorting nexin 10.
      
 0.623
RAB3C
RAB3C, member RAS oncogene family.
   
 0.618
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.