STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZCCHC17Zinc finger CCHC-type containing 17. (241 aa)    
Predicted Functional Partners:
DDX39B
DExD-box helicase 39B.
   
 0.891
DDX39A
DExD-box helicase 39A.
   
 0.891
UTP3
UTP3 small subunit processome component.
   
 0.888
ENSPVAP00000016680
annotation not available
   
 0.886
DDX49
DEAD-box helicase 49.
  
 0.876
WDR46
WD repeat domain 46.
   
 0.873
IMP3
IMP U3 small nucleolar ribonucleoprotein 3.
   
  0.869
UTP25
UTP25 small subunit processor component.
   
 0.868
NOL6
Nucleolar protein 6.
   
  0.867
NOP14
NOP14 nucleolar protein.
   
 0.865
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.