STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATRNAttractin. (1412 aa)    
Predicted Functional Partners:
MGRN1
Mahogunin ring finger 1.
   
 
 0.904
CPN2
Carboxypeptidase N subunit 2.
      
 0.769
RNF157
Ring finger protein 157.
   
 
 0.746
PAFAH1B1
Platelet activating factor acetylhydrolase 1b regulatory subunit 1.
    
 0.721
TBC1D31
TBC1 domain family member 31.
    
 0.705
MC4R
Melanocortin 4 receptor.
    
 
 0.663
BTD
Biotinidase.
      
 0.655
ATCAY
ATCAY kinesin light chain interacting caytaxin.
      
 0.627
ASIP
Agouti signaling protein.
    
 
 0.624
AIMP1
Aminoacyl tRNA synthetase complex interacting multifunctional protein 1.
      
 0.595
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.