STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBRLamin B receptor. (611 aa)    
Predicted Functional Partners:
CYP51A1
Cytochrome P450 family 51 subfamily A member 1.
   
 0.984
MECP2
methyl-CpG binding protein 2.
    
 0.975
MSMO1
Methylsterol monooxygenase 1.
   
 0.962
KPNB1
Karyopherin subunit beta 1.
    
 0.955
SC5D
sterol-C5-desaturase.
   
 0.944
EMD
Emerin.
     
 0.940
DHCR24
24-dehydrocholesterol reductase.
   
 0.924
TM7SF2
Transmembrane 7 superfamily member 2.
  
  
 
0.878
SQLE
Squalene epoxidase.
   
 
 0.869
FAXDC2
Fatty acid hydroxylase domain containing 2.
   
 0.852
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.