STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MINDY2MINDY lysine 48 deubiquitinase 2. (622 aa)    
Predicted Functional Partners:
UBB
Ubiquitin B.
    
   0.858
ENSPVAP00000015543
annotation not available
    
   0.840
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
   0.840
LTN1
Listerin E3 ubiquitin protein ligase 1.
   
  
 0.808
SSH2
Slingshot protein phosphatase 2.
      
 0.696
SETD3
SET domain containing 3, actin histidine methyltransferase.
    
 0.676
MMUT
methylmalonyl-CoA mutase.
    
 0.676
SETD4
SET domain containing 4.
    
 0.676
ENSPVAP00000011891
annotation not available
    
 
 0.650
ENSPVAP00000001321
annotation not available
      
 0.643
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.