STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHROOM1Shroom family member 1. (647 aa)    
Predicted Functional Partners:
SLC36A3
Solute carrier family 36 member 3.
      
 0.800
AFF1
AF4/FMR2 family member 1.
      
 0.724
GRXCR2
Glutaredoxin and cysteine rich domain containing 2.
      
 0.580
CEACAM16
CEA cell adhesion molecule 16, tectorial membrane component.
      
 0.568
GRXCR1
Glutaredoxin and cysteine rich domain containing 1.
      
 0.567
CABP2
Calcium binding protein 2.
      
 0.567
VSTM4
V-set and transmembrane domain containing 4.
      
 0.540
EPB41L5
Erythrocyte membrane protein band 4.1 like 5.
      
 0.540
AFF4
AF4/FMR2 family member 4.
      
 0.540
PWWP3B
PWWP domain containing 3B.
      
 0.539
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.