STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SP4Sp4 transcription factor. (784 aa)    
Predicted Functional Partners:
SP1
Sp1 transcription factor.
    
0.711
TMEM196
Transmembrane protein 196.
      
 0.699
UFC1
Ubiquitin-fold modifier conjugating enzyme 1.
      
 0.695
ENSPVAP00000006200
annotation not available
    
  0.676
NRL
Neural retina leucine zipper.
    
 0.674
SH3RF2
SH3 domain containing ring finger 2.
    
 0.598
SUMO1
Small ubiquitin like modifier 1.
    
 0.566
SHMT2
Serine hydroxymethyltransferase 2.
    
 
 0.562
UBE2I
Ubiquitin conjugating enzyme E2 I.
    
  0.560
CRX
Cone-rod homeobox.
    
 
 0.552
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.