STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIP11Thyroid hormone receptor interactor 11. (1970 aa)    
Predicted Functional Partners:
IFT20
Intraflagellar transport 20.
   
 0.977
ENSPVAP00000014023
annotation not available
   
  0.888
NHS
NHS actin remodeling regulator.
   
 0.807
MIB1
Mindbomb E3 ubiquitin protein ligase 1.
    
 0.802
ARF5
ADP ribosylation factor 5.
   
 0.793
SEC24B
SEC24 homolog B, COPII coat complex component.
   
 0.785
ENSPVAP00000009270
annotation not available
      
 0.745
USO1
USO1 vesicle transport factor.
   
 0.715
RAB11A
RAB11A, member RAS oncogene family.
  
 0.700
RAB11B
RAB11B, member RAS oncogene family.
  
 0.700
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.