STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX55DEAD-box helicase 55. (598 aa)    
Predicted Functional Partners:
FTSJ3
FtsJ RNA 2'-O-methyltransferase 3.
  
 0.987
WDR12
WD repeat domain 12.
   
 0.979
EBNA1BP2
EBNA1 binding protein 2.
   
 0.975
GTPBP4
GTP binding protein 4.
   
 
 0.974
ENSPVAP00000016725
annotation not available
   
 0.970
NOC3L
NOC3 like DNA replication regulator.
   
 
 0.967
RSL24D1
Ribosomal L24 domain containing 1.
   
 
 0.966
NSUN6
NOP2/Sun RNA methyltransferase 6.
  
 
 0.966
ENSPVAP00000011853
annotation not available
  
 
 0.966
ENSPVAP00000010204
annotation not available
   
 
 0.961
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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