STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VAMP8Vesicle associated membrane protein 8. (100 aa)    
Predicted Functional Partners:
STX17
Syntaxin 17.
    
 0.999
SNAP29
Synaptosome associated protein 29.
   
 0.999
STX4
Syntaxin 4.
    
 0.998
SNAP23
Synaptosome associated protein 23.
   
 0.994
STX7
Syntaxin 7.
    
 0.993
VTI1A
Vesicle transport through interaction with t-SNAREs 1A.
   
 0.990
STX5
Syntaxin 5.
    
 0.987
BET1
Bet1 golgi vesicular membrane trafficking protein.
    
 
 0.985
STX8
Syntaxin 8.
    
 0.983
VTI1B
Vesicle transport through interaction with t-SNAREs 1B.
   
 0.983
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.