STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CXCL8C-X-C motif chemokine ligand 8. (127 aa)    
Predicted Functional Partners:
IL1B
Interleukin 1 beta.
   
  
 0.957
ENSPVAP00000010303
annotation not available
   
 
0.939
CXCL6
C-X-C motif chemokine ligand 6.
  
 
0.935
ENSPVAP00000006408
annotation not available
   
 
 0.925
ENSPVAP00000012102
annotation not available
   
 
 0.925
NFKB1
Nuclear factor kappa B subunit 1.
   
 
 0.924
CXCR4
C-X-C motif chemokine receptor 4.
   
 
 0.902
CCR1
C-C motif chemokine receptor 1.
   
 
 0.893
CCR5
C-C motif chemokine receptor 5 (gene/pseudogene).
   
 
 0.890
JUN
Jun proto-oncogene, AP-1 transcription factor subunit.
   
 
 0.890
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.