STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COPECoatomer protein complex subunit epsilon. (308 aa)    
Predicted Functional Partners:
COPB2
Coatomer protein complex subunit beta 2.
   
 0.999
COPA
Coatomer protein complex subunit alpha.
   
 0.999
COPB1
Coatomer protein complex subunit beta 1.
   
 0.993
COPZ1
Coatomer protein complex subunit zeta 1.
   
 0.974
COPZ2
Coatomer protein complex subunit zeta 2.
   
 0.965
COPG1
Coatomer protein complex subunit gamma 1.
   
 0.929
ENSPVAP00000007694
annotation not available
   
 0.929
TSGA13
Testis specific 13.
   
 0.929
ENSPVAP00000011624
annotation not available
   
 0.929
SEC13
SEC13 homolog, nuclear pore and COPII coat complex component.
   
  
 0.896
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.