STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRFN1Leucine rich repeat and fibronectin type III domain containing 1. (678 aa)    
Predicted Functional Partners:
PTPRD
Protein tyrosine phosphatase receptor type D.
    
 0.886
ADGRL2
Adhesion G protein-coupled receptor L2.
    
   0.773
ADGRL3
Adhesion G protein-coupled receptor L3.
    
   0.773
ADGRL1
Adhesion G protein-coupled receptor L1.
    
   0.773
NPTX1
Neuronal pentraxin 1.
      
 0.772
CRTAC1
Cartilage acidic protein 1.
      
 0.769
NTNG1
Netrin G1.
    
 0.752
DLG4
Discs large MAGUK scaffold protein 4.
    
 0.737
GRIA1
Glutamate ionotropic receptor AMPA type subunit 1.
   
 0.733
PTPRF
Protein tyrosine phosphatase receptor type F.
    
 0.732
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.