STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GTDC1Glycosyltransferase like domain containing 1. (450 aa)    
Predicted Functional Partners:
MMADHC
Metabolism of cobalamin associated D.
      
 0.800
ARHGAP15
Rho GTPase activating protein 15.
     
 0.779
HEATR3
HEAT repeat containing 3.
      
 0.769
ZNF592
Zinc finger protein 592.
      
 0.769
LYPD6B
LY6/PLAUR domain containing 6B.
      
 0.769
ORC4
Origin recognition complex subunit 4.
      
 0.769
EPC2
Enhancer of polycomb homolog 2.
    
 
 0.694
ENSPVAP00000000055
annotation not available
    
 
 0.685
ENSPVAP00000006200
annotation not available
    
  0.676
FHIT
Fragile histidine triad diadenosine triphosphatase.
    
 
 0.656
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.