STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TFPTTCF3 fusion partner. (251 aa)    
Predicted Functional Partners:
INO80E
INO80 complex subunit E.
   
 0.995
ACTR8
Actin related protein 8.
    
 0.992
ACTR5
Actin related protein 5.
    
 0.988
INO80C
INO80 complex subunit C.
    
 0.987
MCRS1
Microspherule protein 1.
   
 0.986
RUVBL1
RuvB like AAA ATPase 1.
    
 0.985
NFRKB
Nuclear factor related to kappaB binding protein.
    
 0.983
INO80D
INO80 complex subunit D.
    
 0.976
INO80
INO80 complex ATPase subunit.
    
 0.975
ACTL6A
Actin like 6A.
   
 0.945
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.