STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HDDC3HD domain containing 3. (179 aa)    
Predicted Functional Partners:
RPL11
Ribosomal protein L11.
    
   0.971
ENSPVAP00000010329
annotation not available
    
   0.971
RPS18
Ribosomal protein S18.
    
  0.957
MRPS9
Mitochondrial ribosomal protein S9.
   
 
 0.945
MRPS16
Mitochondrial ribosomal protein S16.
   
 
 0.922
MRPL19
Mitochondrial ribosomal protein L19.
   
   0.920
MRPS6
Mitochondrial ribosomal protein S6.
   
 
 0.920
MRPL27
Mitochondrial ribosomal protein L27.
   
 
 0.918
MRPL36
Mitochondrial ribosomal protein L36.
  
 
 0.917
ENSPVAP00000014247
annotation not available
    
 
 0.915
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.