STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRMD3FERM domain containing 3. (592 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin dependent serine protein kinase.
   
 0.763
TLE4
TLE family member 4, transcriptional corepressor.
      
 0.689
ENSPVAP00000012804
annotation not available
 
      0.592
STX19
Syntaxin 19.
      
 0.571
TBCD
Tubulin folding cofactor D.
      
 0.561
RASEF
RAS and EF-hand domain containing.
 
    
 0.552
ENSPVAP00000001866
annotation not available
   
 0.541
CAMK2B
Calcium/calmodulin dependent protein kinase II beta.
   
 0.541
CAMK2A
Calcium/calmodulin dependent protein kinase II alpha.
   
 0.541
PSAT1
Phosphoserine aminotransferase 1.
      
 0.515
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.